2008-2009 Graduate Calendar

Biological Sciences  
Master of Science in Biological Sciences Doctor of Philosophy in Biological Sciences Fields of Specialization Cell and Molecular Biology Ecology and Evolution Neurobiology and Physiology Plant Sciences and Oenology and Viticulture Interim Dean A Joffre Mercier Faculty of Mathematics and Sciences Associate Dean Rick Cheel Faculty of Mathematics and Science Graduate Faculty Professors Michael Bidochka (Biological Sciences), Douglas H. Bruce (Biological Sciences), Stefan Brudzynski (Psychology), Alan Castle (Biological Sciences), Vincenzo De Luca (Biological Sciences), Yousef Haj-Ahmad (Biological Sciences), Fiona F. Hunter (Biological Sciences), Cheryl McCormick (Psychology), A. Joffre Mercier (Biological Sciences), Gary Pickering, (Biological Sciences), Andrew G. Reynolds (Biological Sciences) Associate Professors Robert L. Carlone (Biological Sciences), Charles Després (Biological Sciences), Debbie Inglis (Biological Sciences), Isabelle Lesschaeve (Cool Climate Oenology & Viticulture Institute), Dan McCarthy (Earth Sciences), John Middleton (Tourism & Environment), Sandra Peters (Physical Education & Kinesiology), Miriam H. Richards (Biological Sciences), Adonis Skandalis (Biological Sciences), Gaynor Spencer (Biological Sciences), Jeffrey Stuart (Biological Sciences), Glenn Tattersall (Biological Sciences), Evangelia L. Tsiani (Community Health Sciences), Hui Di Wang (Community Health Sciences) Assistant Professors Jean Richardson (Biological Sciences), Paul Le Blanc (Community Health Sciences) Adjunct Professors Ralph Brown (University of Guelph), Katrina Brudzynski (Bee-Biomedicals Inc.), Jeannine Delwiche (Ohio State University), Helen Fisher (Department of Plant Agriculture, Vineland Campus, University of Guelph), Ken Giles (New Leaf Biotechnology Inc.), Wendy McFadden-Smith (McSmith Agricultural Research Services), Arthur Retnakaran (Natural Resources Canada, Great Lakes Forestry Centre, Sault-Ste. Marie, ON), Dan Rinker (University of Guelph), Antonet Svircev (Agriculture and Agri-Food Canada, Vineland Station, ON), Lining Tian (Agriculture and Agri-Food Canada, London, ON) Graduate Program Director Debbie Inglis dinglis@brocku.ca Administrative Assistant Beulah Alexander 905-688-5550, extension 3115 Mackenzie Chown, F204 http://www.brocku.ca/biology/graduate/gradstudiesbiol.php  
Program Description Go to top of document
The department offers research-based graduate programs leading to MSc and PhD degrees in Biological Sciences in the following fields: Cell and Molecular Biology; Ecology and Evolution; Neurobiology and Physiology; Plant Sciences, Oenology and Viticulture.  
Admission Requirements - MSc Go to top of document
Successful completion of an Honours Bachelor's degree, or equivalent, normally with an overall average of not less than 78% and having sufficient concentration in the life sciences, physical sciences or mathematics. Agreement from a faculty supervisor to supervise the student is also required for admission to the program. Those lacking sufficient background preparation may be required to complete a qualifying term/year to upgrade their applications. Completion of a qualifying term/year does not guarantee acceptance into the program. The Departmental Graduate Committee will review applications and recommend admission for a limited number of suitable candidates. Part-time study is available.  
Degree Requirements - MSc Go to top of document
Students may be admitted on either a part-time or full-time basis. Students registered as full-time will normally complete all degree requirements within two years. Students registered as part-time will normally complete all degree requirements within four years. Students who wish to transfer to the PhD program must complete one year (12 months) of full-time study as MSc students and then must successfully complete the predoctoral exam (see Program Requirements - PhD, below). All students must complete a research project that culminates in a thesis and demonstrates a capacity for independent thought and work. There will be an oral defence of the written thesis. Students must enroll in BIOL 5F90 each term. In addition to BIOL 5F90, candidates must complete a minimum of one and one-half credits of course work at not less than 70 percent. These must include BIOL 5P95; at least one-half credit from BIOL 5P85, 5P86, 5P87 or 5P88; and one-half credit from BIOL courses numbered 5(alpha)00 or higher. Courses are chosen in consultation with the Supervisory Committee. The thesis supervisor may not instruct all the courses in a candidate's program. Additional credits may be required of candidates with insufficient preparation in the area of research specialization. In addition to the above coursework, students will participate in the running of undergraduate courses in the Department of Biological Sciences at Brock University as teaching assistants for a minimum of one term (for which a graduate teaching stipend will be received).  
Admission Requirements - PhD Go to top of document
Successful completion of a Master's degree, or equivalent in Biological Sciences with an overall average of not less than 80%. Alternatively, students who have successfully completed one year in the Brock Biological Sciences MSc program, normally including completion of all MSc course work with grades of at least 80% in each course, may apply to transfer to the PhD program following successful completion of the Biological Sciences predoctoral exam. Current guidelines for transferring from the MSc to the PhD program should be obtained from the Graduate Program Director. The Departmental Graduate Committee will review applications and recommend admission for a limited number of suitable candidates. Part-time study is not available.  
Degree Requirements - PhD Go to top of document
Students will normally complete all degree requirements within four years following entry into the PhD program. All students must complete a research project that culminates in a thesis and demonstrates independent thought and work, and which represents an original contribution to scientific knowledge. There will be an oral defence of the written thesis. The student will be guided in all aspects of his or her graduate program by a supervisory committee. Students must enroll in BIOL 7F90 each term. In addition, course work is required of all PhD students. Students entering the PhD program after completion of an MSc must satisfactorily complete at least two half courses, namely BIOL 7P95 and a 5(alpha)00 course not cross-listed with a 4(alpha)00 course. Students who transfer from the MSc to the PhD program must satisfactorily complete at least five half courses, namely BIOL 5P95; BIOL 7P95; one of BIOL 5P85, 5P86, 5P87 or 5P88; one half-credit course numbered 5(alpha)00 or higher that is not cross-listed with a 4(alpha)00 course; and one additional BIOL course numbered 5(alpha)00 and higher. The thesis supervisor may not offer all the courses in a candidate's program. When appropriate and with permission of the supervisory committee, courses offered outside the Department of Biological Sciences may be taken to fulfill course requirements. Additional credits may be required of candidates with insufficient preparation in the area of research specialization. Continued enrolment in the Doctor of Philosophy program requires the successful completion of a predoctoral examination. The predoctoral examination will comprise an oral exam on the student's written examination proposal, completed no later thanthe sixth term of study (third or fourth term is recommended). The Predoctoral Examining Committee shall consist of the student's supervisory committee plus two faculty members from the Department of Biological Sciences, one of whom shall be the Departmental Chair or the Chair's Representative. The predoctoral examination has three possible outcomes for students registered in the PhD program: Pass (students may continue in the program), Probation (students will be required to retry the predoctoral exam within a specific time frame, not to exceed 3 months), Fail (students will be required to withdraw from the program immediately). Students on probation will be allowed to retry the examination only once. The predoctoral examination has two possible outcomes for MSc students who wish to transfer to the PhD: Pass (students may transfer to the PhD program), Fail (students will be allowed to submit and defend an MSc thesis).  
Facilities Go to top of document
The department is well equipped with state of the art laboratory equipment for all fields of biology research. A greenhouse, plant growth chamber and facilities for the growth and maintenance of terrestrial and aquatic animals are available to students. Also available are facilities for culture of animal, yeast and bacterial cells; a walk-in plant tissue culture room and associated tissue culture facility; and laminar flow tanks for aquatic animal research. The department's specialized equipment holdings include spectrophotometers, a fluorescence spectrometer; a phosphorimager scanner; a scanning electron microscope; fluorescence microscopes and state of the art computer imaging systems; a confocal microscope; a laser capture microscope, a two-photon laser scanning microscope; computer controlled electrophysiological research stations for stimulation and recording of muscle, nerve and whole animal electrical activity; microplate readers; fluorescence imagers; real-time PCR machines; biophysical spectrometers for high sensitivity absorbance, linear dichroism, circular dichroism, photoacoustic and picosecond time-resolved fluorescence; and a parallel computing PC cluster for mathematical modeling of biological systems. The department also possesses modern genomics and proteomics facilities. The department runs the Wildlife Research Station in Algonquin Provincial Park, a multi-use facility where graduate students from several Universities conduct ecological, physiological and environmental research. Associated with the Department of Biological Sciences, the Cool Climate Oenology and Viticulture Institute (CCOVI) is housed in Inniskillin Hall. The CCOVI research facilities include a biotechnology laboratory, viticulture laboratory, a state of the art sensory evaluation laboratory, pilot winery and a 43,000 bottle wine cellar which includes the Canadian Wine Library.  
Course Descriptions Go to top of document
Note: Not all courses are offered in every session. Students must consult with their research supervisor regarding course offerings and course selection and must have their course selections approved by their research supervisor and the Graduate Program Director each term. Refer to the Timetable for scheduling information: http://www.brocku.ca/registrar/guides/grad/timetable/terms.php BIOL 5F90 MSc Thesis The preparation and public defence of a thesis which will demonstrate the candidate's capacity for independent study. BIOL 5P03 Topics in Photobiology (also offered as CHEM 5P03) A graduate seminar/lecture course covering topics in photobiology. A series of lectures designed to introduce some of the major research areas in photobiology will be followed by student seminars on selected topics (usually two or three papers on one subject). Note: course taught in conjunction with BIOL 4P03. BIOL 5P06 Bioinformatics (also offered as BTEC 5P06) Genome sequencing projects. Gene discovery. Analysis of gene expression. Analysis of DNA/RNA/Protein sequence data, including mutagenic processes, molecular evolution and systematics, codon usage, reconstruction of ancient molecules and prediction of higher level molecular structure. Note: course taught in conjunction with BIOL/BTEC/BCHM 4P06. BIOL 5P09 Topics in Animal and Plant Signal Transduction Pathways (also offered as BTEC 5P09) Perception of stimuli to effects on gene expression. Emphasis on the molecular/biochemical tools used to study these pathways. Note: course taught in conjunction with BIOL/BTEC/BCHM 4P09. BIOL 5P10 Mechanisms in Plant Biochemistry (also offered as BTEC 5P10) Molecular and chemical control of plant disease processes and development. Focus on the detailed signaling mechanisms and outcomes of signal transduction to a plant phenotype. Emphasis on case studies that highlight the different phases of this process, including the identification of signals, signal perception, signal transduction and reaction to the signal transduction cascade to produce a phenotype. BIOL 5P13 Bioenergetics Current topics in the molecular and biochemical basis of animal cell bioenergetics, including oxidative phosphorylation, production of reactive oxygen species, apoptosis, and mitochondrial function in health and disease. Note: course taught in conjunction with BIOL 4P13. BIOL 5P20 Advanced Sensory Evaluation of Wines This course will focus on the measurement techniques used in the sensory evaluation of wine and food. Other topics covered include the physiology of taste and olfaction, chemistry of aroma and flavour, origins of off-odors in wines, and advanced readings in current topics in sensory evaluation and sensory science. Note: course taught in conjunction with OEVI 4P20. BIOL 5P28 Developmental Neurobiology A seminar course on the principles of neural development. Topics include cell lineage and early determinative events, trophic functions, growth and plasticity, synaptogenesis and gene expression in the establishment of the nervous system. Note: course taught in conjunction with BIOL 4P28. BIOL 5P29 Current Topics in Animal Physiology Topical subjects in animal physiology, covering recent and/or controversial research in respiratory, thermoregulatory, and cardiovascular physiology and their neural control. Topics may vary from year to year depending on student interests. Note: course taught in conjunction with BIOL 4P29. BIOL 5P34 Systems Neurophysiology Neuronal networks and integrative mechanisms in the nervous system. Selected topics include the visual system, rhythm generators and motor function, and learning and memory. Note: course taught in conjunction with BIOL 4P34. BIOL 5P41 Selected Topics in Biophysics A course offered using the combined biophysical resources of Brock, McMaster, Guelph and Waterloo universities. Participation in two symposia. Information concerning the course and the selection of individual symposia can be obtained from the departmental course co-ordinator. BIOL 5P50 Mutagenesis in Disease and Biotechnology (also offered as BTEC 5P50) This seminar course will explore the various mechanisms of mutagenesis of the genetic material, how they contribute to disease, and how they can be adapted to produce new biomolecules. Note: course taught in conjunction with BIOL 4P50. BIOL 5P51 Molecular Virology A seminar course on virus-host interaction, productive cycle, effect of virus on host cell and organism, interferon, DNA and RNA tumor viruses, viral vectors, gene therapy and recombinant viral vaccines. Note: course taught in conjunction with BIOL/BTEC 4P51. BIOL 5P53 Immunology (also offered as BTEC 5P53) A seminar course on humoral and cellular immunity; structure and synthesis of immunoglobulins; origin of antibody diversity; transplantation immunity and the importance of the major histocompatibility complex; autoimmunity and allergic reactions. Note: course taught in conjunction with BIOL 4P53. BIOL 5P56 Genes and Behaviour Genetic, developmental and environmental influences on the behaviour of invertebrates and vertebrates. Single versus multilocus effects and the inheritance of quantitative behavioural traits. Analyses of gene expression and genetic pathways influencing behaviour in model animals. Note: course taught in conjunction with BIOL 4P56. BIOL 5P57 Bacterial Genetics (also offered as BTEC 5P57) Molecular and transmission genetics of bacteria. Bacterial genetics from early description of transformation and transduction to current developments in molecular genetics. Note: course taught in conjunction with BIOL/BTEC 4P57. BIOL 5P58 Fungal Genetics An examination of transmission and molecular genetics of fungi. Recent advances in gene manipulation and the contribution of studies on these organisms to general genetics principles. Note: course taught in conjunction with BIOL/BTEC 4P58. BIOL 5P61 Natural Selection and Adaptation A seminar course with an emphasis on reading and discussion of current literature encompassing empirical studies of natural selection and adaptation. The course will also include an examination of both the theoretical and empirical foundations underlying current research in the field. Note: course taught in conjunction with BIOL 4P61. BIOL 5P64 Insect Behaviour Exploration of selected topics in the field of insect behaviour. Topics include programming and integration of behaviour, orientation and dispersal, feeding behaviour, chemical, visual and acoustical communication, defensive behaviour, reproductive behaviour and the eusocial insects. Note: course taught in conjunction with BIOL 4P64. BIOL 5P66 Insect Biology Current topics in the field of insect biology. Possible course themes include: behavioural ecology of insects, insect systematics, coevolution of plants and insects, speciation processes, evolution of insect mating systems, insect metamorphosis. BIOL 5P67 Biophysical Techniques (also offered as BTEC 5P67 and CHEM 5P67) An advanced seminar/lecture course on experimental techniques in biophysics. The focus is on understanding the theory, applications and limitations of a variety of techniques students will encounter during their graduate studies. Techniques will range from advanced spectroscopy (absorption, fluorescence, NMR, X-ray diffraction) to molecular biochemistry. Note: course taught in conjunction with BIOL/CHEM/BCHM 4P67. BIOL 5P68 Sociobiology How natural selection shapes social behaviour, with emphasis on kin selection, reciprocity, and exploitation in the evolution of co-operation and altruism. Particular attention will be paid to insect societies. BIOL 5P73 Advanced Wine Flavour Flavour compounds. Critical analysis and discussion of current literature, and how it informs our understanding of the specific roles of viticultural and oenological practices in the formation of wine flavour. Recent advances in the analytical and sensoric measurement of aroma, taste and tactile stimuli. Note: an appropriate background in wine chemistry and sensory evaluation is recommended. BIOL 5P85 Current Topics in Ecology and Evolution This course will cover three or four current topics in ecology and evolution and involve critical analysis and discussion of current literature. Topics include concepts in behavioural ecology, community ecology, population ecology, sexual selection, adaptation, and phylogenetic analysis. BIOL 5P86 Current Topics in Basic and Applied Plant Biology (also offered as BTEC 5P86) An investigation into a number of topics in plant biology. Topics will vary and may include plant disease,signal transduction, secondary metabolism, physiology and photosynthesis, biotechnological applications and oenology and viticulture. BIOL 5P87 Current Topics in Neurobiology or Physiology Topics in contemporary Neurobiology and or Physiology at cellular, molecular or systemic levels. Approval of the departmental graduate studies committee is required prior to registration. BIOL 5P88 Current Topics in Cell and Molecular Biology Recent advances in cellular and molecular biology, including topics such as aging, adaptation, pathological dysfunction, cancer biology, and flow of genetic information BIOL 5P95 MSc Graduate Seminar Students will present seminars and an essay on two topics, one of which differs from their thesis topics. Attendance throughout the academic year, September-April, is required. BIOL 5V80-5V89 Selected Topics in Biological Sciences An investigation of a specific area or group of related topics in biology. Approval of the departmental Graduate Studies committee is required prior to registration. BIOL 7F90 PhD Research and Thesis Preparation, public defence, and examination of a thesis that demonstrates the candidate's capacity for independent thought and study at the appropriate level. BIOL 7P95 PhD Graduate Seminar Designed to familiarize students with active areas of research in all fields of biological science. Students will attend the weekly biology seminar series, read relevant literature prior to the presentation, engage in discussion with the seminar speakers, and produce two essays on topics chosen from the seminar series. Student discussions with seminar speakers will be facilitated by faculty in the Department of Biological Sciences.  
Last updated: March 24, 2008 @ 11:46AM